The NCBI web site (http://www.ncbi.nlm.nih.gov) can also be used to search for protein sequences. Instead of performing
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The NCBI web site (http://www.ncbi.nlm.nih.gov) can also be used to search for protein sequences. Instead of performing a BLAST search with a nucleic acid query, one performs a protein blast with a polypeptide (amino acid sequence) query. Assume that you have the following partial sequence of a polypeptide:
GYDVEKNNSRIKLGLKSLVSKGILVQTKGTGASGSFKLNKKAASGEAKPQAKKAGAAKA
Go to the NCBI web site and access the BLAST tool. Then click on protein blast and enter the query sequence in the box at the top. Then click BLAST. What is the identity of your query sequence?
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Related Book For
Principles of Genetics
ISBN: 978-1119142287
7th edition
Authors: D. Peter Snustad, Michael J. Simmons
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