Answered step by step
Verified Expert Solution
Link Copied!

Question

1 Approved Answer

A k-mer P is defined as a palindrome if its reverse complement is identical to itself, e.g., ATCCGGAT. Many DNA-binding proteins are dimers , formed

A k-mer P is defined as a palindrome if its reverse complement is identical to itself, e.g., ATCCGGAT. Many DNA-binding proteins are dimers, formed by two identical protein domains in opposite directions. As a result, the DNA sequences recognized by these proteins are palindromes. Devise an algorithm(psuedo-code) to output all palindromes of a given length k (e.g., k=8 in the above example) in an input DNA sequence Text. What is the running time of your algorithm in term of Big-O notation?

Step by Step Solution

There are 3 Steps involved in it

Step: 1

blur-text-image

Get Instant Access to Expert-Tailored Solutions

See step-by-step solutions with expert insights and AI powered tools for academic success

Step: 2

blur-text-image

Step: 3

blur-text-image

Ace Your Homework with AI

Get the answers you need in no time with our AI-driven, step-by-step assistance

Get Started

Recommended Textbook for

Machine Learning And Knowledge Discovery In Databases European Conference Ecml Pkdd 2010 Barcelona Spain September 2010 Proceedings Part 3 Lnai 6323

Authors: Jose L. Balcazar ,Francesco Bonchi ,Aristides Gionis ,Michele Sebag

2010th Edition

3642159389, 978-3642159381

More Books

Students also viewed these Databases questions

Question

6. Have you used solid reasoning in your argument?

Answered: 1 week ago