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Exercise 3: The example in the textbook has the following alignment. ACDEFADF AFDA-CCF A--EFFDC ACAEFA-C ADDEFADF What are the emission probabilities for Match(7)? Say that

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Exercise 3: The example in the textbook has the following alignment. ACDEFADF AFDA-CCF A--EFFDC ACAEFA-C ADDEFADF What are the emission probabilities for Match(7)? Say that we want to align the string Text = ADEFDAAF to this multiple alignment, and it produces the following alignment. ACDEFAD--F AFDA-CC--F A--EFFD--C ACAEFA---C ADDEFAD--F A-DEF-DAAF What is the path (i.e., sequence of states) corresponding to aligning Text to the existing multiple alignment in this way? Exercise 3: The example in the textbook has the following alignment. ACDEFADF AFDA-CCF A--EFFDC ACAEFA-C ADDEFADF What are the emission probabilities for Match(7)? Say that we want to align the string Text = ADEFDAAF to this multiple alignment, and it produces the following alignment. ACDEFAD--F AFDA-CC--F A--EFFD--C ACAEFA---C ADDEFAD--F A-DEF-DAAF What is the path (i.e., sequence of states) corresponding to aligning Text to the existing multiple alignment in this way

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