Question: Problem 1 - Global Alignment (10pts) Find the optimal global alignment of ACG and AACT with Scoring rules as: match = 1, mismatch =
Problem 1 - Global Alignment (10pts) Find the optimal global alignment of ACG and AACT with Scoring rules as: match = 1, mismatch = 0, gap penalty d=1. You need to fill in the remaining cells in Figure 1 and show the optimal alignment. Note that some cells in the figure have two arrows, denoting two different ways that cell was calculated A C G 0-1 -2 -3 A-11 0 -1 A -2 0 1. 0 C-3 1-1 1 1 , . 1 T-4 Figure 1: Global Alignment Problem 1 - Global Alignment (10pts) Find the optimal global alignment of ACG and AACT with Scoring rules as: match = 1, mismatch = 0, gap penalty d=1. You need to fill in the remaining cells in Figure 1 and show the optimal alignment. Note that some cells in the figure have two arrows, denoting two different ways that cell was calculated A C G 0-1 -2 -3 A-11 0 -1 A -2 0 1. 0 C-3 1-1 1 1 , . 1 T-4 Figure 1: Global Alignment
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To find the optimal global alignment of the sequences ACG and AACT with the given scoring rules match 1 mismatch 0 gap penalty d 1 you can use dynamic ... View full answer
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