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The graph shows the same three short sequences aligned in two different ways. Score each alignment, suppose you reward a match with 2 points, penalize

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The graph shows the same three short sequences aligned in two different ways. Score each alignment, suppose you reward a match with 2 points, penalize a mismatch with -3 and a gap with -5. what is the score for alignment (1)

image text in transcribed

What is the score for alignment (2)?

image text in transcribed

Which alignment is better, 1, 2, or the same?

A G DA DA A D GA D - A-G-D A A G DA D A A- D G A D

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