Answered step by step
Verified Expert Solution
Link Copied!

Question

1 Approved Answer

Write a Matlab function for Distance = CalculateDistancePatternDna(k-mer,Dna) that would input a k-mer for example, AAA and a set of strings (Dna) for example, [TTACCTTAAC]

Write a Matlab function for Distance = CalculateDistancePatternDna(k-mer,Dna) that would input a k-mer for example, AAA

and a set of strings (Dna) for example,

[TTACCTTAAC]

|GATATCTGTC|

|ACGGCGTTCG|

|CCCTAAAGAG|

[CGTCAGAGGT]

and will return the sum of all the minimum Hamming distances of each string.

An example is given below,

image text in transcribed

image text in transcribed

Distance between a k-mer and a String (Text) GATTCTCA, GCAAAGACGCTGACCAAL 3 GATTCTCA GCAA A GAC GC T GAC CAA Distance: 7 6 7 5 8 3 8 7 46 dfPattern, String) minimum distance between Pattern and all k-mers in String

Step by Step Solution

There are 3 Steps involved in it

Step: 1

blur-text-image

Get Instant Access to Expert-Tailored Solutions

See step-by-step solutions with expert insights and AI powered tools for academic success

Step: 2

blur-text-image

Step: 3

blur-text-image

Ace Your Homework with AI

Get the answers you need in no time with our AI-driven, step-by-step assistance

Get Started

Recommended Textbook for

Concepts Of Database Management

Authors: Joy L. Starks, Philip J. Pratt, Mary Z. Last

9th Edition

1337093424, 978-1337093422

More Books

Students also viewed these Databases questions

Question

a. Did you express your anger verbally? Physically?

Answered: 1 week ago