Answered step by step
Verified Expert Solution
Link Copied!

Question

1 Approved Answer

All one question. Im so lost. def rev-comp-seq(seq): # Given a DNA sequence in string object, this function will return its reverse # complementary sequence

All one question. Im so lost. image text in transcribed
image text in transcribed
image text in transcribed
def rev-comp-seq(seq): # Given a DNA sequence in string object, this function will return its reverse # complementary sequence (a named string object). For example, ATGC will get GCAT rev_comp_seq return rev_comp_seq The FASTA Sequence File (Assignmer a.fasta) has [41 sequences in total. 1. # The 2nd sequence will need to be 2, the third one 3 (1) General Information Sequence Name : [..] Description : [..] sequence: [.) Reverse Complementary Sequence: ...] Sequence Length: [358] Nucleotide Counts (A=102. T=52- G=100, GC content-46-10% C=108) (2) 6-Frame Translation Frame (+1)MDCHPIWREVRYCEYPLHVEMACKR Frame (+2) MCHPTWREVRYCEYPLHVEMACKR Frame (+3): MHPIWREVRYCEYPLHVEMACKR r)MRFVRYCEYPLHVEMACk Frame (-2): MRYCEYPLHVEMACKRLLLLLLLR Frame (-3) MDCHPINREVRYCEYPLHVEMAC (3) Codon Usage ATG 33 ACT 21 (1) Call the function process file_dict0 by providing the required argument, which was provided-by the command line input and obtain a named dictionary that contains both keys (sequence names) and values (descriptions and sequences as the tuple). (2) Now, you need to navigate each key of the dictionary and retrieve the corresponding values (i.e. sequence description and sequence base). Then, you can call the functions that you code to get the proper print out

Step by Step Solution

There are 3 Steps involved in it

Step: 1

blur-text-image

Get Instant Access to Expert-Tailored Solutions

See step-by-step solutions with expert insights and AI powered tools for academic success

Step: 2

blur-text-image_2

Step: 3

blur-text-image_3

Ace Your Homework with AI

Get the answers you need in no time with our AI-driven, step-by-step assistance

Get Started

Recommended Textbook for

Machine Learning And Knowledge Discovery In Databases European Conference Ecml Pkdd 2022 Grenoble France September 19 23 2022 Proceedings Part 4 Lnai 13716

Authors: Massih-Reza Amini ,Stephane Canu ,Asja Fischer ,Tias Guns ,Petra Kralj Novak ,Grigorios Tsoumakas

1st Edition

3031264118, 978-3031264115

More Books

Students also viewed these Databases questions