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help with this: Histone deacetylases ( HDACs ) are zinc - dependent enzymes that catalyse the conversion of acetyllysine to lysine. a ) Propose the
help with this:
Histone deacetylases HDACs are zincdependent enzymes that catalyse the conversion of
acetyllysine to lysine.
a Propose the mechanism for the HDACcatalysed reaction.
b What is the role of zinc ion in HDAC catalysis?
c Draw the pHactivity profile for HDACcatalysed conversion of acetyllysine to lysine.
Explain.
d Suggest two acetyllysine analogues that are substrates for HDACs. One should be a better
substrate than acetyllysine, whereas the other one should be a worse substrate than
acetyllysine. Explain.
e Mutations in the HDAC sequence could lead to a loss of the catalytic function. Which
mutations are problematic?
f Lysine acetylation is a reversible reaction using acetylCoA as a cosubstrate. Which
coenzymes are required for synthesis of acetylCoA in nature? Propose the mechanism.
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