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help with this: Histone deacetylases ( HDACs ) are zinc - dependent enzymes that catalyse the conversion of acetyllysine to lysine. a ) Propose the

help with this:
Histone deacetylases (HDACs) are zinc-dependent enzymes that catalyse the conversion of
acetyllysine to lysine.
a) Propose the mechanism for the HDAC-catalysed reaction.
b) What is the role of zinc ion in HDAC catalysis?
c) Draw the pH-activity profile for HDAC-catalysed conversion of acetyllysine to lysine.
Explain.
d) Suggest two acetyllysine analogues that are substrates for HDACs. One should be a better
substrate than acetyllysine, whereas the other one should be a worse substrate than
acetyllysine. Explain.
e) Mutations in the HDAC sequence could lead to a loss of the catalytic function. Which
mutations are problematic?
f) Lysine acetylation is a reversible reaction using acetyl-CoA as a co-substrate. Which
coenzymes are required for synthesis of acetyl-CoA in nature? Propose the mechanism.
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