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Implement the Smith-Waterman algorithm in C that accepts a substitution matrix. You may assume the substitution matrix is formatted as a CSV, without the labels.

Implement the Smith-Waterman algorithm in C that accepts a substitution matrix.

You may assume the substitution matrix is formatted as a CSV, without the labels.

A,C,G,T

0,1,1,1

1,0,1,1

1,1,0,1

1,1,1,0

The returned values from the functions should contain all the information needed to construct alignments and the score.

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