Question
In a defined population, the major histocompatibility complex (MHC) haplotype HLA-DQB12*0302 is present in 30% of individuals. When carrying out a study on 60 patients
In a defined population, the major histocompatibility complex (MHC) haplotype HLA-DQB12*0302 is present in 30% of individuals. When carrying out a study on 60 patients with type 1 diabetes mellitus from this population, it is found that 30 of them have HLA-DQB12*0302.
Using a manually calculated -test, determine whether there is any evidence that the HLA-DQB12*0302 allele is associated with susceptibility to type 1 diabetes based upon these data. In your answer, you should present the following:
a.A data table based upon Table1. Use the values to calculate your -value.
DQB12*0302 | Observed | Expected | Obs-Exp | (Obs-Exp)2 | (Obs-Exp)2/Exp |
---|---|---|---|---|---|
Present | |||||
Absent |
b.The number of degrees of freedom and how you derived this.
c.The P-value, based upon the values found in Table2, that any association has occurred by chance.
Degrees of freedom | Probability | ||||
---|---|---|---|---|---|
0.9 | 0.5 | 0.1 | 0.05 | 0.01 | |
1 | 0.02 | 0.46 | 2.71 | 3.84 | 6.64 |
2 | 0.21 | 1.39 | 4.61 | 5.99 | 9.21 |
3 | 0.58 | 2.37 | 6.25 | 7.82 | 11.35 |
4 | 1.06 | 3.36 | 7.78 | 9.49 | 13.28 |
5 | 1.61 | 4.35 | 9.24 | 11.07 | 15.09 |
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