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java code modification compile using Biojava Take code and modify to allow for include another prompt for a type of the ID (DNA or protein)
java code modification compile using Biojava Take code and modify to allow for include another prompt for a type of the ID (DNA or protein) import org.biojava.bio.BioException; import org.biojavax.bio.db.ncbi.GenbankRichSequenceDB; import org.biojavax.bio.seq.RichSequence; import java.util.Scanner; public class fetchGenBank { public static void main(String[] args) { RichSequence rs = null; GenbankRichSequenceDB grsdb = new GenbankRichSequenceDB(); Scanner input = new Scanner(System.in); try{ // get data via GenBank accession number or gi number System.out.println("Enter a GenBank accession number or gi number: "); String id = input.nextLine(); rs = grsdb.getRichSequence(id); System.out.println(rs.getName()+" | "+rs.getDescription()); System.out.println(rs.seqString()); } catch(BioException be){ be.printStackTrace(); System.exit(-1); } } }
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