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Table 3: Absorbance values per minute for varied substrate concentrations with Inhibitor Time (min) Concentration (mM) 2.0 5.0 8.0 12.0 20.0 0 0 0 0
Table 3: Absorbance values per minute for varied substrate concentrations with Inhibitor
| Time (min) |
|
|
|
|
|
Concentration (mM) |
| 2.0 | 5.0 | 8.0 | 12.0 | 20.0 |
| 0 | 0 | 0 | 0 | 0 | 0 |
Absorbance | 1 | 0.01 | 0.03 | 0.04 | 0.045 | 0.05 |
Table 4: Absorbance values versus substrate concentration at a constant time with Inhibitor
Concentration (mM) | 2.0 | 5.0 | 8.0 | 12.0 | 20.0 |
Absorbance | 0.001 | 0.02 | 0.03 | 0.05 | 0.08 |
- Create a scatter plot of the data in Table 3. This graph compares the absorbance values over time (or product formation over time. The graph should contain a line for each concentration of -galactosidase with inhibitor present that was measured. Obtain the equation for each line and the R2 value. Include this graph in your data section.
- Using concentrations and the corresponding absorption values from Table 7, create a graph of absorbance vs. concentration. Obtain the equation for each line and the R2 value. Include this graph in your data section.
- Determine the rate of reaction for each concentration with inhibitor. You can obtain the rate of reaction (initial velocity) by taking the slope of 2 mM obtained from the graph of Table 3 and dividing by the slope of the line from Table 4 (repeat for each concentration.) This is the rate of reaction for each concentration.
- Using the information from question 4, create a graph comparing velocity of -galactosidase and ONPG concentration. This is the Michaelis-Menten plot. Remember the units for velocity are mM/min.
- Create a Lineweaver-Burk plot by taking the reciprocal of both axes from the Michaelis-Menten values from question 3.
- Based on the graphs constructed in Questions 4 and 5, compare velocity of -galactosidase and ONPG concentrations with 250 M inhibitor present. Determine the Km and Vmax for the reaction by visually observing the Michaelis-Menten plot. Compare this qualitative data by calculating Km and Vmax using the slope from the Lineweaver-Burk plot.
- Utilizing the data from week 1 (without inhibitor) create a combined Michaelis-Menten plot that includes data for both the uninhibited reaction and the inhibited reaction. Repeat this to make a combined Lineweaver-Burk plot as well.
- Determine if the inhibitor used is a competitive, uncompetitive, and non-competitive inhibitor and explain.
- Propose a mechanism under which the type of inhibitor determined in Question 9 could interact with the enzyme. How are you convinced?
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