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You are given two data sets ( . xlsx files ) , stored the position of cancer cells during migration experiment in two different matrices,
You are given two data sets xlsx files stored the position of cancer cells during migration experiment in two
different matrices, Collagen Matrix with a high concentration of collagen and Collagen Matrix with a low
concentration of collagen. The structure of data in each file is as follows:
The first three columns store the cell coordinate point XYZ X coordinate stored in first, Y in the second and Z the
third column
Column four contain the information about the time step.
Column five is the ID of cells. Each cell has a unique ID
Using the provided data sets, answer the following questions:
a How many cancer cells were analyzed in each matrix? Write a program to answer this question.
b How many cells have a full track of migration? Write a program to answer this question.
c Find the speed for each individual cell in each matrix using the following formula:
SpeedNet Cell Displacementtotal time
You may calculate the distance between two points in the space using: DistancesqrtXfXiYfYiZfZi
where X Y Z is the coordinate of the first point and X Y Z is the
coordinate of the second point. The interval between two consecutive
time steps is mins or hour
d For cells migrated in the two matrices:
I. Create a boxplot of the migration speed.
II Find the mean, median, standard deviation of the migration speed in each
matrix
III. To the boxplots of part I add
The relevant data points to each boxplot Add Mean Line segment. Write every programs in R studio
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