Question
(Data Mining short Python code only.) I just need some code to start bellow. Please help me write some Python code. Only fill the YOUR
(Data Mining short Python code only.)
I just need some code to start bellow. Please help me write some Python code. Only fill the YOUR CODE HERE part.
Frequent Pattern Mining
implementing the APRIORI algorithm for Frequent Pattern Mining using Python. In order to implement the full algorithm, you will need to write two helper functions: a candidate generator and a support counter. Once you have a working candidate generator and support counter, you can implement the APRIORI algorithm and run it on the three provided datasets (described below). Each function has type hints to help you understand what the expected inputs/outputs are.
As in Assignment 2, this notebook povides a template of the functions you will need to implement. Your task is to read and understand each step of this assignment and to fill in the areas marked YOUR CODE HERE. DO NOT alter any code outside of the marked areas or your work may not run or generate the correct output.
Data
3 files each including a transaction dataset; each row is a seperate transaction so transaction ID's are omitted.
dataset1.txt -> 100 transactions
dataset2.txt -> 400 transactions
dataset3.txt -> 800 transactions
Your code shoule be able to handle all 3 datasets in a reasonable timeframe (<1min each at most)
##Python code###
# Imports - DO NOT CHANGE
from itertools import combinations
from time import time
from typing import List, Dict
from gcsfs import GCSFileSystem
# Download datasets - may take a few seconds
fs = GCSFileSystem(project='csci4800-dm', token='anon', access='read_only')
fs.get('csci4800-data/assignment_3/dataset1.txt', './dataset1.txt')
fs.get('csci4800-data/assignment_3/dataset2.txt', './dataset2.txt')
fs.get('csci4800-data/assignment_3/dataset3.txt', './dataset3.txt')
# Declare timed decorator for timing functions
"""
NOTE: This is a helper function (called a decorator) that outputs the runtime of a function, it is used by placing
@timed above the declaration of a function.
"""
def timed(f):
def time_wrap(*args, **kwargs):
t_start = time()
result = f(*args, **kwargs)
t_end = time()
if f.__name__ == 'gen_candidates':
print("func: {} took: {:E} sec and generated {} candidates for k = {}".format(
f.__name__, t_end-t_start, len(result), args[1]))
else:
print("func: {} took: {:E} sec".format(f.__name__, t_end-t_start))
return result
return time_wrap
Step 1 - Candidate Generator
Write the function that generates potential frequent candidates at each level of the iterative APRIORI algorithm. Use the lecture notes for a description of how the algorithm works, if you need specific implementation help: first read the python documentation, if that does not solve the issue then you may stop by for the TA's office hours.
Notes:
Even though you are not using SQL, the SQL implementation in the lecture notes (slide 15) provides a good blueprint for designing this function using Python
A good way to store the candidates is as a dictionary (Python dict) with key -> values pairs being candidate -> count setting the initial counts all to 0.
Python dicts cannot store sets or lists as keys, but you can convert a string to a set/list and vice-versa with ' '.join() and .split(' ')
You can iterate through dict keys using a for statement (e.g. for itemset in L.keys())
The Python itertools module provides a function (combinations) for generating all subsets of length k of a set
Code gose here:
@timed
def gen_candidates(L: Dict[str, int], k: int) -> Dict[str, int]:
"""
Generates candidate itemsets from the k-1 frequent itemsets
:param L: frequent itemsets at k-1 as a dict of itemset -> count pairs
:param k: length of itemsets being generated
:returns: dict of candidate itemsets
"""
C = {}
"""
*
* YOUR CODE HERE
*
"""
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